And now they got me a bit confused again. In this picture:
The blue wire coming from the output transformer connects to the power tube socket, and the red to the eyelet board. But in the layout they printed out and sent with the kit, it says that the red goes to the tube socket and the blue to the eyelet board. This is probably a mistake, since A. the pictures are somewhat proof of a working amp, and B. I've looked up several other layouts on the Internet for a 5F1 and they all said that the blue wire goes to the tube socket and the red to the board. I've sent an email to TAD trying to make sure before I melt solder there - they'll likely reply on Monday.
The other wires from the output transformer I've connected thus (as per their layout): black to ground, green to tip (black to ground seems to be a common theme with the speaker wires too).